rs254389873 SNP Detail

Summary

• ID
  rs254389873
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124750422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATTCTGG TATTTCCTTT
  AAACTTAAAA GCAAGACAAC TTCCTGGGAA GATAAACTAA AATTAGCTCA CTTTGCTTGG
  ATTTCCCATC AGTGCTTTCT ACCAAATAAA GAACAAGTAA GTTTAACGTA GAACTTGTAC
  GTTTTATGAT CTAAAATAAT TTCATGTACA GCTTGGATAT TAACATTTAA AAGATTAGAA
  R
  ACATGTTGGG GAGAAAACTT GATTTGCAGT CACTGTCAGT GAAGAAGCAG TGGGGCTTTT
  GGATTGCTAG GCGGGAAGTT GAGAAGTTGG AAAGTGCTAG TCTGAGGGCA AGCTAGAAGC
  AGGTAGGTAC CAGTTATGAT GTTCTATTGG GATTTCTTAA GTTGCTGTGG CTAAAAAGTA
  GGCAGTGCAG CTGTGGTAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322855983	CHEV_8_126547583	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254389873					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124750422 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21265	CpG island 21265	1837 bp distal
Gm45732	predicted gene 45732	1389 bp downstream
Mir1967	microRNA 1967	961 bp downstream
Rr672605	regulatory region 672605	1796 bp distal
Urb2	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	within coordinates