rs254408803 SNP Detail

Summary

• ID
  rs254408803
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8858341 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCAATTCA AGACTTTTTT
  TTTTTTTGCC TACAATTGGA TTAGAATTTT CTCACTGGAA CTATTTGTTA TTCTGAGTTA
  TTTATATTTT AAGGAAAAGA TTCATTTTTA TTCTTTACTG GTGTGTGTGT GTGTGTGTGT
  TTGTATACAT GTGTATGTGG GTGCCCATTG AATTCAGAAG AGGGCACTAG ACCCTTGGAG
  M
  AGGTACCACA GGCAGCTGTG GGCCATCCAA TGTGGGGACC TCTACATGAG CAGTTTGTGC
  TCTTAACCAA TGAGGAACCT CGCCAGCTTC TGCAGACGTG CACTTATCTG TCTATTTATA
  TCCCTGTTAT GTTCATTTAT TCTCATCCCC TGTATGAAGC ATGTCCCAGG GATGAGAGTC
  ATTTTACATT TTTATATCTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323246161	CHEV_10_8702395	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254408803					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8858341 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	260 bp proximal
Rr223852	regulatory region 223852	737 bp proximal