rs254427465 SNP Detail

Summary

• ID
  rs254427465
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70847732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGATAAAGC AAATACAGAT TACGAACCAT
  TATCTTATTC TGTTTAGGTG AATAATAGGA TCATCAACTG ACACTACAAT GAAAAATTGA
  TTGGGGAACT TTTTAAGTGG CAAAATTGAG CTGACTCCTT AGAACTCAAA GTTTGGTAGC
  Y
  ACATTATCAA AAGTGGGGCA GACAAATAAT CTGCACCTTA TGGCATAACA cagggctctg
  cacgcttttt atgtagaggt tcagatagta aatatgtagg tgtcagatac cttgggcatc
  gaaggataca tggtctctgt tgctattaTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321816278	CHEV_6_70820742	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254427465					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70847732 () rs orientation: forward

Symbol	Name	Function Class
Eif2ak3	eukaryotic translation initiation factor 2 alpha kinase 3	within coordinates
Rr399692	regulatory region 399692	1479 bp upstream