rs254459994 SNP Detail

Summary

• ID
  rs254459994
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:64735506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGATTGCA AAACATAGAT
  ATGTAGGAAG AGTCATGAAG TGGACATTTT GGATCTCAGT ACCGAGTCAT ACCTAGTAAC
  ATAAGTTTGT TTAATAGAAA GGAGATACTT TGTCTAGGGC TGGGATGGTC ATCAGGATGT
  TTAGAAGAGT CATCTATGGG TTAACAAGGT GGGGTAAACG TGCCTTCTTA CCAAGCCAGC
  Y
  GACCTGAGTC CAGTACCCAG GGACCACATG GTGGAAGGAG AGAACTGACT TCTACTCGTT
  GTTGTCAGAG CTCCAGGTGG GTGAGGGGAC ACGAGCATGC TCCCACACTA CACAGAGAAA
  TAAAATGTAG GGGTCTTGTT TGGTTTTGTT TTGAAACTAA GCTGGTCTGA GTAGGCTGCA
  GTGGCAAGAG ACCTGGGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322985947	CHEV_9_64676031	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254459994					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:64735506 () rs orientation: forward

Symbol	Name	Function Class
Dennd4a	DENN domain containing 4A	within coordinates
Rr201294	regulatory region 201294	1106 bp distal
Rr210200	regulatory region 210200	within coordinates
Tssr2912	transcription start site region 2912	1896 bp downstream