rs254490285 SNP Detail

Summary

• ID
  rs254490285
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96965613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTGCTAGA AAGTGCTATG
  CAGAAGGCTG GGGAAGGAGT TTCAACCAGA TTTACTTGCT GTGGACTCAA TATGCACAAT
  ACTGATTGGC TAGGCAAGAT GAACCTACTG GCGTAACACT GGCAGGCCTA TTTCAGGGGA
  TGCCCATCTG CTTTCCGACT GGATCAGACA GAGGCTTGCT CCAGAGGAAA AGTTTCACAG
  Y
  TGGTTCTAAA AACTGGTCAA ACCCCGTGAC TAATGGGGAA ATGATTGCTA AATGGACATG
  ACAGGCCCGT CAGATGGCTG TCAGTGCCAT GCTCATGCCA CAGAAGGATG CTGCTAAATG
  GACATGACAG GCCCGTCAGA TGGCTGTCAG TGCCATGCTC ATGCCACAGA AGGATGCTGC
  TAAATGGACA TGACAGGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323115608	CHEV_9_96983979	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254490285					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96965613 () rs orientation: forward

Symbol	Name	Function Class
Gm16185	predicted gene 16185	1766 bp upstream
Rr685145	regulatory region 685145	within coordinates
Rr685146	regulatory region 685146	1250 bp proximal
Slc25a36	solute carrier family 25, member 36	within coordinates