rs254532682 SNP Detail

Summary

• ID
  rs254532682
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52143332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGGC AGCCCTCAGG GCCATGTTCT
  T
  TGGGCTCTCT CAGCTCTCTT GGCGC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320764106	CHEV_3_52039833	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254532682					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52143332 () rs orientation: forward

Symbol	Name	Function Class
Gm30125	predicted gene, 30125	1536 bp upstream
Gm38132	predicted gene, 38132	within coordinates
Or14m1-ps1	olfactory receptor family 14 subfamily M member 1, pseudogene 1	927 bp downstream
Rr374955	regulatory region 374955	1617 bp downstream
Rr576473	regulatory region 576473	762 bp proximal