rs254552474 SNP Detail

Summary

• ID
  rs254552474
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100575779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tttacactg tgtgcgtgaa tgttttgcct
  atttgtatat ctgtgtaccg tgtgcatgtc tggtgtccac aaaggtcaga agagggtgcc
  agatcccttg gaactgaaat tagggaaggt cgagctgccg tgCAAGCCAT CGCTCCACCC
  M
  CCATGCCCCA CCACTAATGT TTTGAGAGTA TTTCAGAGTT AATGGAACGG AAGAGAACTG
  AGTCTGTATA ATAGTATTGC AATATGCTAA TTGACATGAG AGGGAAGCTG GGAGAGACAg
  tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325083838	CHEV_15_100508329	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254552474					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100575779 () rs orientation: forward

Symbol	Name	Function Class
Cela1	chymotrypsin-like elastase family, member 1	within coordinates
Tssr136473	transcription start site region 136473	186 bp downstream
Tssr136474	transcription start site region 136474	216 bp downstream
Tssr136475	transcription start site region 136475	275 bp downstream
Tssr136476	transcription start site region 136476	937 bp downstream