rs254572330 SNP Detail

Summary

• ID
  rs254572330
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:39253966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTTAAATA TCTGAACAGG
  GATTGCATTG TGCATTTTAA ATTTCTTAAA TTAACTTATC TTTTTGTATG CATGGTCTAA
  TCATATGTGT GCATACATGA CTGTGGGTTG TGTGAGCCTA CATGTGAGTA TGCAGTGACC
  AGAGGTAGAC ATGGACTGTT CCTCTTGGTG GTTCTCCACA TTTTCTGTTC TCAAAGACAC
  R
  ATCTGTCATT GAACTGGGGC TATTGGTTTT GGCCACTCTG ACCTGCCAAC AAGACCTGGG
  CATGCCCCTG TCTCTGCATC TCAAGCACTG CTGTGACAGA CAGTATGCCC CCATATGCTG
  AAGATCCAAA TTTGGGTCCT GATGCTTATG CAGCAGGCAC TCCACCCACT GAGCCACCTC
  CCCACCCCTA CACTGTGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324322212	CHEV_13_39161859	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254572330					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:39253966 () rs orientation: forward

Symbol	Name	Function Class
Gm60523	predicted gene, 60523	within coordinates
Rr388296	regulatory region 388296	within coordinates