rs254578519 SNP Detail

Summary

• ID
  rs254578519
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:25777796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAGATACA CACTCTGAAC
  CATGGGGGAT ATAAAGATCC ATCAGTCTTC TAAGAGCAGT TATAACATGG TGCTAGATCT
  CACTGTCAGG GCCTTACTAA GACATTGAGA CTATGACTGC AGTTCTACAC TGCTTTCTTG
  AAGACAGGTC CTCAATGTGT CTTATTTCTT CAATATGAAA ACAAGTGAAA AAGCAGGTGG
  Y
  TATCTATGGC AAGTGCTGAT TCACTCCTAC CACATGAGTT TCAGGTTTAC CTAGGACAGT
  TGAGAAGAAG CAATTACCTG ACCCAACTTT TATCACATGG TGAAAAAACC CAGAATTAAG
  CCATATTAAT TAGATGAGTT CGGAAAATGG ATAATTTCCG AACATGAGAT TGTTCACTTT
  GTCTATACCT TAATAACTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324304501	CHEV_13_25685682	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254578519					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:25777796 () rs orientation: forward

Symbol	Name	Function Class
Rr275391	regulatory region 275391	805 bp proximal