rs254582271 SNP Detail

Summary

• ID
  rs254582271
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185416752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCCAACGAG CCTCTTGGCT TGACCTTCTA GTGCTGGGAT
  GACAGGTACA AGCCGTGCCG TGAGCCTTGC CTTTCACATG AGTGTTGGAG ATCTAAGCAC
  T
  GGTCTCCGTG CTGGTTTGGA GAGCACCTTA TTCACTGAGC CATCTCCTTG GGCCTCTCAC
  ATATTGTTAG ATTTCGTGGT TGGTGTGGGG AATCAGACA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320178631	CHEV_1_187508434	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254582271					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185416752 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	1995 bp distal
Rr425422	regulatory region 425422	243 bp proximal
Rr425423	regulatory region 425423	431 bp proximal