rs254647448 SNP Detail

Summary

• ID
  rs254647448
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:40530001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GATGCATCT AGGGTAGAAT TCAGGGCTGT
  GTGTTTCAGG AAAGACATCC ACCACTCTTT TTTTTTGCCt attattttga cacagggtct
  cactgcatta cccaggctga tcttaaactc tatagcccag ccagacctta aacttataat
  Y
  ctcctgcttc agcctctaaa gtagctggga ttacatgcct ggaccactag gtctggcACA
  ATTTTTTGTA AGTGACAGAT CAAATTGTTT CTGATGCCTT CTAGAGTTGC ATGTCAAGAG
  CTGATGCTAA TACATTGTGA GAGGCAGCCA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322193577	CHEV_7_48135947	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254647448					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:40530001 () rs orientation: forward

Symbol	Name	Function Class
A230077H06Rik	RIKEN cDNA A230077H06 gene	within coordinates
Gm25784	predicted gene, 25784	839 bp downstream
Gm28307	predicted gene 28307	within coordinates