rs254829543 SNP Detail

Summary

• ID
  rs254829543
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:103911103 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATTTGTTT TAATTTGAGA AAGGAAATGA
  GTCAGGGAGT GGGGGGGAAA TCTAGAGGGA GAAGGGAAGT ATGGAAGAAA TGCAGCTGAG
  GTGCAGTCAC TAGGTGGGTG GGAAGTGTGC TCCTTGCCCT CTGAGCTCTT GAAAACTGCC
  M
  TTCTCCTGGA ATCCACATAA CCTAGAAAGA ATTCAGCAGG AGGGGGAGGA AGTAAGGGAG
  GGCAAAGGAA GAATATGAAT GTGCTTACAG TATATTGTAG GCAAGTATGA AATTGTCAAA
  CTTTTAATTA AAAGATAAAA ATGAGAAAGC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320443669	CHEV_2_103920915	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254829543					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103911103 () rs orientation: forward

Symbol	Name	Function Class
Cd59b	CD59b antigen	Intron
Rr562020	regulatory region 562020	1634 bp distal
Rr562021	regulatory region 562021	771 bp proximal
Rr562022	regulatory region 562022	1793 bp proximal