rs254979268 SNP Detail

Summary

• ID
  rs254979268
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:24175517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAAAACAA AATCACCACC
  ACAAAACCCA TCTCTTTCTT TGAGTTGGCC ACCACAAGAA TTTTGTCACA GTGATAGAAT
  CAACACACAC CTCCTCTCTG TCTGGGCTAA GCCAAGGCTG ATGCACATCT CTGCTGAGCT
  TCTGAACAAT TCCACTCCTG TTCTTTCCCC AAGTTGTCTT CTTTTTGGAT GCATCATTCA
  K
  CCAGCTGTTT CTGCAGTAGG TCCTTGTGTC TAAATGCCCA GTCACTGTAT TTTGCACAAG
  CTTGAGATCC CAAGGGGTGT CCTTAGTGCC ATGCCTGTTG GAGAGGGGCT TGAAGCCCAG
  AGAGTGCTAA CTGGTTATGT CGGGAATGTT CCATTTGGCA GACATCTACT ATGAACCTCT
  GGTTGGATCT GCATCTGCCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323598002	CHEV_11_24125517	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254979268					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:24175517 () rs orientation: forward

Symbol	Name	Function Class
D11Mit152	DNA segment, Chr 11, Massachusetts Institute of Technology 152	756 bp proximal
Gm33440	predicted gene, 33440	within coordinates
Rr385801	regulatory region 385801	within coordinates