rs254984460 SNP Detail

Summary

• ID
  rs254984460
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:57168297 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTCCTGCC ATCTTTCAAA
  GAGAAGATGC TCAACCTGGT GTCCACACTG CAGCAACTGA TCGGCCAGCT CACTAGTCTT
  CGAATACAGC TCCTGTTTAT GATTCTGACC TCTCCAAGAT ATGTGAACCG GAGTGACTGA
  GTTCCTCCAG CAGAAGTTGA AAGCAGTCAC AGCTGTTGGC TTTGAAGAAG GAACTGATGC
  Y
  GGAGGCGCAG CAGGAGGCAC TTCACGAGCA GGCAGCTCTG GAGCCCAAGT TGGAACAGCT
  GCGCTGGAGA CCAGAGAGCT GCAGAGATTG AAGCTGACAT CTTCAAGAGG TACAACCGTG
  GTCTTGTGAA GCTGATGGGA ACCTCTCTGT GACGCGCACC CTCTGTGTCC CCCACCCTCC
  TTCCCAGCTA CCAGGTGGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323316483	CHEV_10_57012007	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254984460					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:57168297 () rs orientation: forward

Symbol	Name	Function Class
Gm7001	predicted gene 7001	within coordinates
Gm66529	predicted gene, 66529	201 bp upstream