rs255034911 SNP Detail

Summary

• ID
  rs255034911
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13439946 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGTCTGC AGTGAACTTG
  CAGGAGAACT TGGTGTGGTT TGGAGCTGCA AAGCTCTCCT GGAAGAAGTA CTTTTCAGAT
  GTACAGTTGA TGCTGTCCTG CTGGGATGCT GGGGTATAGC CTGTAGAACA CACATCCTCT
  CAGCAGCCAG CCCCTCCCTG ACCCCCACGG TCCATGAAGG AGGTCCTGCA TCCCCAGCCA
  Y
  TCTCGTAGGA AGCAGACACG CTGCTACATT TGTGGTCACT CACCTGCTAA GAAGCTGTGC
  AGGGTGTGTG TGAGGCCAGC CCAGGAACTG TTTTCAGAGA CATTGTAGGA AATCTTCAGC
  CCTCTTTCCC CATACACGTC CGGTCTCAAG GTTACCCCTG CAAGGAAAGC AAGCCTCCTT
  GATCAGTTTC TCCTAACACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322506495	CHEV_8_13389946	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255034911					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13439946 () rs orientation: forward

Symbol	Name	Function Class
Atp4b	ATPase, H+/K+ exchanging, beta polypeptide	within coordinates
Gm45410	predicted gene 45410	1160 bp upstream
Rr659923	regulatory region 659923	902 bp proximal
Tssr80441	transcription start site region 80441	1131 bp upstream
Tssr80442	transcription start site region 80442	244 bp upstream
Tssr80443	transcription start site region 80443	80 bp upstream
Tssr80444	transcription start site region 80444	153 bp downstream