rs255088120 SNP Detail

Summary

• ID
  rs255088120
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:28536053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAT AGTCCCCTAA GCAAGTTGCA
  A
  CTTCAGCAGA TTCCACCGTC TACTA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323608765	CHEV_11_28486053	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255088120					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:28536053 () rs orientation: forward

Symbol	Name	Function Class
Ccdc85a	coiled-coil domain containing 85A	1729 bp upstream
Cpgi2667	CpG island 2667	1618 bp distal
Rr233134	regulatory region 233134	1453 bp distal
Rr246448	regulatory region 246448	1452 bp distal
Tssr107205	transcription start site region 107205	1948 bp upstream
Tssr107206	transcription start site region 107206	1824 bp upstream
Tssr107207	transcription start site region 107207	1744 bp upstream