rs255118720 SNP Detail

Summary

• ID
  rs255118720
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181339573 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGCACCGA TGACCCAGCA
  CCAGTAAAGT CCATATAGAA CATCTAAGGT GATTTAGGAC AATCATCACT CAAGATTTCT
  GAACCAGGGG TAAGAGTCCA GAGAATTGGT TTCTGTGGAT ATATGACTGC AGTTTTAAGG
  ACTACCCGCT AATTGCCTTC TCCCCACTCA CAAAGAAACC CTCTGTCCAA TCCTCAGAAA
  R
  CTCTGAGCCT AAGTGGGGGT CCTTCAGATG CTAAGGTGGC TAAAAGGCCT ACCCAGCCTC
  TGGCAATCGA CTGTGCATGG AATGTCCATG TCTTCTGCCT TCTCTTGGTG TGTATAGTCT
  ACATCAGGGT GTCGGGGGCT CTTTCTGCAG ACCCAGTTCC TAGTGGGGCC AAAGTTAAGG
  GCGACTGCAG AGTCTTCTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320161703	CHEV_1_183442139	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255118720					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181339573 () rs orientation: forward

Symbol	Name	Function Class
Ccdc121rt1	coiled-coil domain containing 121, retrogene 1	557 bp upstream
Cpgi1136	CpG island 1136	1144 bp distal
Rr424762	regulatory region 424762	414 bp distal
Rr424763	regulatory region 424763	503 bp distal
Rr424764	regulatory region 424764	433 bp proximal