rs255136444 SNP Detail

Summary

• ID
  rs255136444
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24561296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    attatctct ggtgtgatgt ctggttaatt
  ctaattggtg tgcctcttta cttacttgac atttttacct taccactttt aatattcttt
  ctttgttttg tgcatttggt gttttgattt ttatgttatg ggaggaattt cttttctggt
  Y
  ctgtctattt ggaggtctgt aggcttcttt gacctagccc actcagtcag tcaacaggtg
  ctccagcgct gaagtgagga ttaaaacgaa atcagacaat tagacattgt agcatgaccc
  cagtcaattg tgagactgaa ggcaggttta                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324295917	CHEV_13_24469182	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255136444					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24561296 () rs orientation: forward

Symbol	Name	Function Class
Cmah	cytidine monophospho-N-acetylneuraminic acid hydroxylase	within coordinates
Gm11342	predicted gene 11342	1363 bp upstream
Rr476039	regulatory region 476039	1374 bp distal
Rr476040	regulatory region 476040	1220 bp distal
Tssr4016	transcription start site region 4016	1252 bp downstream
Tssr118892	transcription start site region 118892	1268 bp downstream
Tssr118893	transcription start site region 118893	1204 bp downstream
Tssr118894	transcription start site region 118894	1168 bp downstream
Tssr118895	transcription start site region 118895	1116 bp downstream
Tssr121784	transcription start site region 121784	1354 bp upstream
Tssr121785	transcription start site region 121785	1341 bp upstream
Tssr121786	transcription start site region 121786	1280 bp upstream