rs255147188 SNP Detail

Summary

• ID
  rs255147188
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84574548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGCCTGGC TTTTGCTTTT GTAGCTATAT
  TGACACAGCA CGTAGGGAAC ATGAGGAAGA CAGTTCTGGC CCCAACAAGG GACCCAAAGA
  GAGGAAGGAA TAACATTACC TATTCCCCCC CCCCCCCCAA GAGCACACTG ACAATGGTAC
  R
  TGGTAGAACA CCCAGGTAGC TTCACCTCTT AAAGGTGCCA CCATTTCCCA ATAGCACCAC
  AGGCCTTTAA CACATAGGTC TTTGGAGAAT ACTCATCCAA GCTATAAACA GTTTCCTTCT
  CCAGTGAGGC AGAACTTTTT TGATCTTTCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325261883	CHEV_16_84777905	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255147188					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84574548 () rs orientation: forward

Symbol	Name	Function Class
Jam2	junction adhesion molecule 2	within coordinates
Rr392068	regulatory region 392068	521 bp upstream