rs255182887 SNP Detail

Summary

• ID
  rs255182887
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:59436422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAAGCAGG CTGAGCAAGC
  CATGGAGATT GAGTCAGTAA GCAGCACTCC TCCATTGCTT CTGCTTCAAT TCCTGCCTCC
  ATGGTCCTGC CTTGAGTGTT TGCCTTGACT TCTTTCTCTA AAGGACTGTG ATCTGAGAAT
  TGTAAGCTAA AATAAACTCT TTCCTCCCCA AATTGTTTCT GGCTGTGCTG TTTTATCACA
  R
  TAGAAACCCT AAGACAGAGA CCCAAGGGGG AAGGAAGAAA GCCTACTGAA GTACCAGATG
  TCAGAGGTGG AGGGGAGCCA TTCTAGAAAG CTGAGACATC AAATACCCAA AGTAATGGTA
  AAATTCACTA GGCAACCAAT AATCCCTACA CTGGGGAGGC AGAGGCAGGG AGATATCTGA
  GTTCAAGGTC AGCCTGGTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321141014	CHEV_4_59449294	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255182887					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59436422 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14346	CpG island 14346	1467 bp proximal
Rr101075	regulatory region 101075	578 bp proximal
Susd1	sushi domain containing 1	within coordinates
Tssr37430	transcription start site region 37430	1731 bp upstream
Tssr41933	transcription start site region 41933	1868 bp downstream
Tssr41934	transcription start site region 41934	1923 bp downstream