rs255195103 SNP Detail

Summary

• ID
  rs255195103
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40691677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    actcttctg ttgcctctat ggtgaaatgc
  ttgcctggcc tattaggatc catgggagtg atcccttcct gtctctgtga cttcatctcc
  ccgtgctttc ccttgttcat tgtgctccag acacactTAT TCACCACACC CTCTGTACCT
  Y
  CTGGAGGGCT GTCTCCAGTT CACCACAAGA TGGTCCTGTC TTTTGTATTT CAACTCAAAC
  ACCACTTTTC CAAACTGAGA CTGTAGTCCC CTATTCTCTT TCCAAGCTGC CAGTCATACA
  CTTTTGCCCT CACATGTCCA CTGTCTGAAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322919553	CHEV_9_40588464	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255195103					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40691677 () rs orientation: forward

Symbol	Name	Function Class
Clmp	CXADR-like membrane protein	within coordinates
Cpgi21601	CpG island 21601	1870 bp proximal
Gm16096	predicted gene 16096	146 bp downstream
Tssr84467	transcription start site region 84467	16 bp downstream
Tssr84468	transcription start site region 84468	695 bp upstream
Tssr84469	transcription start site region 84469	747 bp upstream
Tssr84470	transcription start site region 84470	1896 bp upstream