rs255236334 SNP Detail

Summary

• ID
  rs255236334
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:69816680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTACTTTGT GACAGCAGAG
  TTCTGAGAAG ACTGGCTAGG GTGAGGAAAT GCTGACGGGG TTGAGTTAGA CGAGCTCAGC
  CTTCAAGGCT CTAGTTAAGT ATCCTTTCCT GAAGAGTTCT CCCAACTGTG TCTGTACCCC
  TGTGTCAGAA TCCCAGATAG CTCAGATAGC TCTCTCTGAC AGTATTAAGT AGTTAGTAAT
  K
  GCTACTGTGT AATCAGTAAC TATTTTCACT TAGCCATTTA GTGTTCTCTG GTTTTATGGA
  TATCTATAGA TAGAATAATC TAGTTCTCTC TCTCTCTCTT TCCCTCTCTC TCTCTCTCTG
  CAACAGGGTC TCTCTATTAT GCAGCTCTGT CTTTCCTGAA CTCCCTATGC AGAATAGGCT
  GGACTCCAAC TCAGGGAGAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324085541	CHEV_12_70870893	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255236334					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69816680 () rs orientation: forward

Symbol	Name	Function Class
Cdkl1	cyclin dependent kinase like 1	Intron
Tssr116525	transcription start site region 116525	599 bp upstream
Tssr116526	transcription start site region 116526	164 bp upstream