rs255261591 SNP Detail

Summary

• ID
  rs255261591
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74027073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACCAGAAGA CCTCTCCCCA CCCCCATCTC
  TTGGCCCCTA GGCCCTCCTC CAGTCCCCAG TCCCTGAGCC TGGGTGGGGC CATCTCAGTC
  TCCCCTAGCA AGATAATCTG ATGGGCACTG CCAGCTCCTA TTCAGGGCCC TGTCCAGTcc
  Y
  cccccccccc cccccccccc gcccGTTACT CAAACCGGAA ACCTGGAATG GCAGGTTTCC
  ATCAGATCTC CTGACCAGGC CAACAGGATG TGTCTGTGTT CTGGGGACAA TGAGTCCCGA
  GGGCGGGTGA CAATGAGTGA GTGACCCACA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319793231	CHEV_1_74034488	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255261591					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74027073 () rs orientation: forward

Symbol	Name	Function Class
Rr17341	regulatory region 17341	873 bp distal
Rr27623	regulatory region 27623	897 bp distal
Rr34548	regulatory region 34548	within coordinates
Tns1	tensin 1	within coordinates
Tssr12229	transcription start site region 12229	1112 bp upstream