rs255280250 SNP Detail

Summary

• ID
  rs255280250
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107563765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AACCTGTGT TACCTTCTTC CTTACCTTCA
  TCTCTGTCAC TCTTCAGAAG TGCATTGATT CATCAAACAG AACTGGCTAC CCACTCTTGT
  TTATGTAGAA CACTACTATT ATTCAAATTG CTATGCTACT CTAATATTAA CTTTCGGGGG
  M
  CCCCTTCTTG TTTAgggctg aggatacagc tcagccgtag agtgcttgcc cagctctgct
  gaggccctCC CTGACTTCCA ACGTCCAGGA TCCTTGTCAG GAAGTAAACA GAAATGCGCC
  TGGTCCCTTG CACGGGTCTG GGCTCTCGGT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250225	CHEV_4_107379173	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255280250					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107563765 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
Gm57502	predicted gene, 57502	within coordinates
Gm70287	predicted gene, 70287	within coordinates
Tssr38261	transcription start site region 38261	462 bp upstream
Tssr38262	transcription start site region 38262	488 bp upstream
Tssr38263	transcription start site region 38263	498 bp upstream
Tssr38264	transcription start site region 38264	508 bp upstream
Tssr38265	transcription start site region 38265	526 bp upstream