rs255305377 SNP Detail

Summary

• ID
  rs255305377
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124153122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGGCCCTA GTCCCGGTAC
  TTTCCAGCCT CTCTGTACTT CCTTGTTCTT GTTTTTCTGA GAACATCAGC TCTGGTATTT
  TCCCATGCCT TGCAAGATGG CGTTACTGCA GTTAGCTGGC TAAGCCTTAT GAAGGGGTCT
  TTCATTCCCC CCTCTTTCTG TAAACTGAAT AAAATCTTTT ATTCACGTGA TTTACAATCT
  Y
  CTATTGTCTT AAGTTGATGA TATTGTTGAG TCAGAACCAG GGCCTGCACT ACCGAAATCC
  TGTCTTTGAT AAACTGGACC AGGCGATTGA GAATACAAGG CCCAAAGAGT AAAATTAACA
  AGAGGATTAT CAGGGGACCC ATGATGGTGG ATATCAGGGT GGTGAACCAA GGGGACTTAT
  TAAACAGCCC TTCAAACCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322855348	CHEV_8_125950283	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255305377					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124153122 () rs orientation: forward

Symbol	Name	Function Class
Mela	melanoma antigen	within coordinates
Rr183291	regulatory region 183291	1868 bp distal
Tssr2728	transcription start site region 2728	1090 bp downstream
Tssr83353	transcription start site region 83353	354 bp downstream
Tssr83354	transcription start site region 83354	1175 bp downstream
Tssr83355	transcription start site region 83355	1262 bp downstream
Tssr83356	transcription start site region 83356	1339 bp downstream
Tssr83357	transcription start site region 83357	1454 bp downstream
Tssr83358	transcription start site region 83358	1719 bp downstream