rs255327973 SNP Detail

Summary

• ID
  rs255327973
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:37297739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCCCTCTCA GAGGAGTTTT ACAATTTACT
  TCTATGACTA TTTTGGGATA TTTTAGCTTA TTTTTTATAA AGTGAAATGT GTGAGTCtgt
  gaatgggttt gtgcccatga gtgtaagtgc ccagagtgtc cagaagaggg catcagaccc
  Y
  tatgatggag cttgagttat aggcatttgt gagcaaccag acatgtgtgc agggaactga
  attcagggca gtgagtgctc ttactgagcc atctctctgg ctccTCAGGG AAGTTTTAAC
  GCATGAAGAA GTGAAATTCA AAACAGGACC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319691061	CHEV_1_37315503	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255327973					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37297739 () rs orientation: forward

Symbol	Name	Function Class
Cnga3	cyclic nucleotide gated channel alpha 3	within coordinates
Gm69908	predicted gene, 69908	1699 bp downstream
Rr409496	regulatory region 409496	4 bp distal