rs255342661 SNP Detail

Summary

• ID
  rs255342661
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13264542 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAAGTAGC CCTCAGCAAA
  ATGGAGCCAA AACCCCTCTG CACAAAGGCA GGTTGCTGCC TGTAGCCCTC TGCGCTTGTA
  TGGGAAGTGT CTCAACGCCA CCACGCCCGG CTATCTCAAC GCTTTCTTAG CAGGAGTCTG
  CACACGGATT TTCTAGCAGG CTACTACTCT GAGTTAATTA GTGATGATGC GCTTTTGGAT
  R
  CATGGAGCAA GTTCCATGCC TGGCAGTGGT GGAGCATGTG CATGCTTTTA ATCCTAGCAC
  TCAGGAGGCA GAGGCGGAGG TGGAGGCAGG AGGATATCTG TGAGTTCAAG GCCAGCCTGG
  TCCACAGAGT GAGTTTCAGG ACAGCCAGGG CTACATAGAG AAATTCTGTC TCAACCAATA
  ACTAACTAAC TAACTAACTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505141	CHEV_8_13214542	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255342661					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13264542 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	462 bp upstream
Rr368495	regulatory region 368495	706 bp downstream
Rr368496	regulatory region 368496	369 bp downstream
Rr659886	regulatory region 659886	1037 bp distal
Rr659887	regulatory region 659887	1079 bp distal
Rr659888	regulatory region 659888	19 bp distal
Rr659889	regulatory region 659889	418 bp distal
Rr659890	regulatory region 659890	1929 bp proximal