rs255483747 SNP Detail

Summary

• ID
  rs255483747
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30841726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGATGGGT TCGTGGGAGA
  TTTTAGGATC AGTGCATTGC AGAACATCTA TGTAAGGGGG CCATTGCACA GGAGAATACT
  GTAGGGGCCC CAGCCAAAAT GAGTGGGGAT GGACCACTGC GAGGGCCAAG ACAATAAACA
  GGCCAAGTTC AACACAAATG GGGATCTGCT CTGATGGGCA TGTCTAGGTA AGCTGGGGGG
  R
  GGGGGGGAAG GTGTCTCCGC TGTGATCCTG GTGCGTGCCC CTCACCCCCA TCCATCCATC
  ACTCACCTTC TCACTCTCAG TACAGATCTG AATGGCATTG GGGATGAGCT TAGCCGTCTT
  CTCCTTCTTC AGACAGGTCA CTTCCTTCAA CTGGATGGAA ATCTTAAAAG ACAGCACAGG
  GCAGTGAGAA CTAGCCAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	CE/J	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZW/LacJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	ST/bJ	SWR/J	WSB/EiJ
ss370923627	MGP_WTSI_7_31927320	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	A	A	A	A	A	A	A	A	A	A	A	A	G	G	G	A	A	G	G	A	A	A	G	A	G	G	A	A	G	G	G	G	G	A	G	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	CE/J	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZW/LacJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	ST/bJ	SWR/J	WSB/EiJ
rs255483747					SNP	G	G	G	A	A	A	A	A	A	A	A	A	A	A	A	G	G	G	A	A	G	G	A	A	A	G	A	G	G	A	A	G	G	G	G	G	A	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss370923627	MGP_WTSI_7_31927320	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30841726 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18838	CpG island 18838	386 bp proximal
Gramd1a	GRAM domain containing 1A	within coordinates
Rr645031	regulatory region 645031	1696 bp distal
Tssr71945	transcription start site region 71945	326 bp downstream