rs255495737 SNP Detail

Summary

• ID
  rs255495737
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:121068272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGCGGGGC GATGCTACAG
  AGCTGGTTCT CTATGATAGG CAGGGGCGGG GCAACGCTCC AGAGCTGGTT CTCTATGATA
  GGCGGAGGCG GGGCAACGCT ACAGAGCTGG TTCTCTCGAC GTTCATGCGT ACTGGGAATG
  GAGCCATAGC ACCATGCCTG CACAACACAC ACTTTTGCAC ACTGGGCTAT CTCACTGTCC
  A
  CCCCCCCCCC AAGACATCTC ATTCCCCCCC ACTAAGCTAT CTCACTGCCC CCCTTACTGA
  GTTATCTATC TCACTGTTTC CCCCACTGAG CTATCTCACT GTCCCCACTG AGACATCTCA
  CTATCCCCAC TGAGTCATCT CACTGCCCCC CACTCAGCTA TCTTAATGTC CCCCCACTGA
  GCTATCTCAT TGTCCCCCCA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57L/J	C58/J	CE/J	DBA/1J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	LP/J	MA/MyJ	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss392779833	MGP_WTSI_14_121230082	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57L/J	C58/J	CE/J	DBA/1J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	LP/J	MA/MyJ	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs255495737					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss392779833	MGP_WTSI_14_121230082	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:121068272 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6879	CpG island 6879	1062 bp proximal
Rr287002	regulatory region 287002	1272 bp distal
Rr287003	regulatory region 287003	729 bp proximal
Rr390218	regulatory region 390218	1202 bp upstream
Rr404289	regulatory region 404289	940 bp upstream