rs255551952 SNP Detail

Summary

• ID
  rs255551952
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:58736561 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACACTA GTCGATGTGC
  GCCATTCCTG TTCATACCAC TGCTACTAGA AACACTGTCT TCAGACAGGA AAAAGAAGGG
  AAGACAGGGT TCAGCAGCAG GTGAGCTCCC TTCTCTTACA CTCTTTTGAT CAAATCCATA
  ATTATTTCAC TTTATAAAAA TGAACATATT CCCAGCTCCC ACATGGCAGC CCTCAACCAT
  Y
  TGTTAAGTCA GACATCTCTT CTCACCTCCA AGGCTTGTGC ACTACACAGT GTGCATACAC
  ATACAAGTAA ATACTTTTTA AAATAATTGT TAAAATTAGG CAAAACATTT TGCCTACATG
  TAAGCTGAAA TGGATGCAGG ACATAGACAT GTTTAATGAA AACACTGGAA CTGGACATCT
  CTATGCACAA GCAAGGAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323694264	CHEV_11_58659237	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255551952					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58736561 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2935	CpG island 2935	1294 bp proximal
Gm12258	predicted gene 12258	1423 bp upstream
Rr246822	regulatory region 246822	1039 bp proximal
Rr402593	regulatory region 402593	1156 bp upstream
Tssr101753	transcription start site region 101753	1418 bp upstream