rs255573075 SNP Detail

Summary

• ID
  rs255573075
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25112718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCCCCCAC TGTGGGGGGT
  TTCATTCTCT AAGCTTTTTT CTCACTTGAA TTTCCGTGTA CCTTTTGGCT GTTTAGAGCA
  AAACCGAGGC ACTGCAGGCT GACAAAGAGA GGCTGACAGC TGCGCTTCCT CTCTCCACCC
  ATTTGTGATT GCCAGCACAG TAGATGGAAG TGCTACTGCC TGGACAGTTG TCCTGTCCTC
  R
  CACTGTTGAC AGATTCATCC AGTTCCCTAG CCACTCACAA GGGAAGCAGA GTTCAGTTAA
  GAAGACGTTC ACTTTGGGTG TGCTGGTGTG TGCCAGCACT GGAGGCTGAA GAGGGCTTTG
  AGTTTCCCCT CCCCTCCCCT CCCCTCCCCT CCCCTCCCCT CCCCTCCCCT CCCCTCCCCT
  CCCCTCCCCT CCCCTCCCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322121690	CHEV_7_26198312	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255573075					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25112718 () rs orientation: forward

Symbol	Name	Function Class
4732471J01Rik	RIKEN cDNA 4732471J01 gene	within coordinates
Cxcl17	C-X-C motif chemokine ligand 17	407 bp upstream
Tssr2143	transcription start site region 2143	491 bp upstream
Tssr2144	transcription start site region 2144	343 bp upstream
Tssr2145	transcription start site region 2145	319 bp upstream
Tssr2146	transcription start site region 2146	306 bp upstream
Tssr2147	transcription start site region 2147	261 bp upstream
Tssr71243	transcription start site region 71243	477 bp upstream
Tssr71244	transcription start site region 71244	452 bp upstream
Tssr71245	transcription start site region 71245	437 bp upstream
Tssr71246	transcription start site region 71246	408 bp upstream
Tssr71247	transcription start site region 71247	380 bp upstream