rs255593999 SNP Detail

Summary

• ID
  rs255593999
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142012725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGA GATCAGAGGA CAACTTGTAG
  R
  AATTGGTTCT CTCCTTTCAC CGTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322471344	CHEV_7_149644893	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255593999					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142012725 () rs orientation: forward

Symbol	Name	Function Class
D430042D18Rik	Riken cDNA D430042D18 gene	within coordinates
Lsp1	lymphocyte specific 1	1858 bp upstream
Rr154798	regulatory region 154798	1325 bp distal
Rr154799	regulatory region 154799	125 bp distal
Rr166987	regulatory region 166987	1675 bp proximal
Rr400723	regulatory region 400723	1613 bp upstream
Tssr70170	transcription start site region 70170	1835 bp upstream
Tssr70171	transcription start site region 70171	1846 bp upstream