rs255627344 SNP Detail

Summary

• ID
  rs255627344
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:101205928 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCAAAATA TTTTAATTTT
  TTCCTCTACC AACAGTTCCC CCACTCTCTT TCTTTTGTGT TTTCCCATCC CATTCCCAGT
  ATCCTTTCTA TTTCACACCA CATGTGACCT TTACCCAGCC CCACCCTTTC TCAACACTTC
  TTGTTTCCCT CTTGCAGTCT CCTGTCTAGT TTCACACTCT CTAACCCACT TTCCCAAACT
  Y
  TTACTAACAC AGGGTCTGCA GACAAGGGGG AACAGGTGAT TGTTTTTCTT TCTGAGACTT
  GGTCACCTCA CTTACTATAC AATCCTTTAC AGTTCCATCA GTTTTCCTGC AAATTTCATT
  TTTTCCTTTA CCTTAGTAGT TTAAAACTGT GTCTGTGAAT GTATGTGTGG GTGTGTGCAT
  GCATGCAGGT GCCCTCGGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323149608	CHEV_9_101231059	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255627344					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101205928 () rs orientation: forward

Symbol	Name	Function Class
Rr198413	regulatory region 198413	within coordinates
Rr206996	regulatory region 206996	1329 bp distal