rs255643833 SNP Detail

Summary

• ID
  rs255643833
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67142922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGTACAAC CACTATTCAC TTTCAAGCAT
  TTACAAATAC TCAAGCCTGA CTCTTAAACC TTAAAATCAT GGAACGTGAA AGGGAAAATG
  TTACAATGTT GCCATCTTTT TTATGGCTGC TGTATTCCCT GTCAGGATGT TGTCCTGAGA
  G
  GTTAAATTAT CATGTATTTT GGCAAGATGA CATGTTTTTT TTTTTTTTTT TAATCAACAT
  TCCCATCATC TGTCCAAATC TAAAGGTGAA AAACCTGACA GAAGAGATGG CAGGCCTGGA
  TGAAAATATC GCCAAGCTGA CCAAGGAGAA                                 
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323719216	CHEV_11_67065598	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255643833					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67142922 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Rr449442	regulatory region 449442	1702 bp proximal
Tssr3526	transcription start site region 3526	1719 bp downstream
Tssr3527	transcription start site region 3527	1219 bp upstream
Tssr102188	transcription start site region 102188	1758 bp downstream
Tssr102189	transcription start site region 102189	1570 bp downstream
Tssr102190	transcription start site region 102190	1554 bp downstream
Tssr102191	transcription start site region 102191	1533 bp downstream
Tssr102192	transcription start site region 102192	1527 bp downstream
Tssr102193	transcription start site region 102193	1484 bp downstream
Tssr102194	transcription start site region 102194	1342 bp downstream
Tssr102195	transcription start site region 102195	1259 bp downstream
Tssr102196	transcription start site region 102196	1220 bp downstream
Tssr102197	transcription start site region 102197	1176 bp downstream
Tssr102198	transcription start site region 102198	1115 bp downstream
Tssr102199	transcription start site region 102199	361 bp downstream
Tssr102200	transcription start site region 102200	210 bp downstream
Tssr102201	transcription start site region 102201	1379 bp upstream
Tssr102202	transcription start site region 102202	1901 bp upstream
Tssr102203	transcription start site region 102203	1961 bp upstream
Tssr108528	transcription start site region 108528	1452 bp upstream
Tssr108529	transcription start site region 108529	1138 bp upstream
Tssr108530	transcription start site region 108530	1136 bp upstream
Tssr108531	transcription start site region 108531	1108 bp upstream
Tssr108532	transcription start site region 108532	338 bp upstream
Tssr108533	transcription start site region 108533	186 bp upstream
Tssr108534	transcription start site region 108534	500 bp downstream
Tssr108535	transcription start site region 108535	596 bp downstream
Tssr108536	transcription start site region 108536	1948 bp downstream
Tssr108537	transcription start site region 108537	1960 bp downstream