rs255657296 SNP Detail

Summary

• ID
  rs255657296
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105116489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCATCTACA TCTAGGCACT TACTGTGTCT TGAAACCTGA
  AGTCCTCCTA GGCTCTTTCC CCCATCCATC CATCCATCCA TCCATCCATC CATCCATCCA
  W
  CCAACATTTA TTCAGTTCTT TCTGTCCCAC TGGGGCTGGC TTTGGCTAAT AGTGGGTAAT
  TCAGAGATGA AGCAGTCTTA GTCCTTAAGA ACCAAGTGA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321243329	CHEV_4_104931897	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255657296					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105116489 () rs orientation: forward

Symbol	Name	Function Class
Gm54244	predicted gene, 54244	1983 bp upstream
Rr596570	regulatory region 596570	868 bp distal
Rr596571	regulatory region 596571	1197 bp proximal
Rr596572	regulatory region 596572	1613 bp proximal
Tssr38160	transcription start site region 38160	733 bp downstream
Tssr38161	transcription start site region 38161	670 bp downstream