rs255765596 SNP Detail

Summary

• ID
  rs255765596
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:90654087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTAAAGT GAAGAGACTG
  CAGGTGGAAC TTTGCTGAGA GTCCCTTGGT CTCAGTGAAA CCTCACTCAT TTGATCACTG
  CTCTTTGCTG TTAGTTATAT ATTGCACAAG GGTGCTATAG AAAGTGTCCT TCTGCAGCCT
  AGGCCACAAA GGTTTCCCTG GTCAGTCTTT TCAGTCCTTG GTTGTAGCCA GGTCTCTTTG
  K
  TTGCTTTGAG TACAGATCCG TTCAACCAGG TTTAGCATAA CCTATCTCAC TTCATGACCA
  CCCAAACTGA CTATCCCTAG AGCATTGTAT CCATCAGTCA GAGGTCACTT CAGCAAGCCC
  GCCCAAGCCC TAGTCACTCC CCTTTCTGCT CCATCCTGCT GAACTCCATG GCCTTGACGT
  CAATCACTCT CTTGCCAGCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320391275	CHEV_2_90663900	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255765596					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:90654087 () rs orientation: forward

Symbol	Name	Function Class
Agbl2	ATP/GTP binding protein-like 2	within coordinates
Rr373531	regulatory region 373531	within coordinates
Rr560574	regulatory region 560574	294 bp distal
Rr560575	regulatory region 560575	32 bp proximal
Rr560576	regulatory region 560576	1766 bp proximal