rs255775132 SNP Detail

Summary

• ID
  rs255775132
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:75367912 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGCCTCTG AAATCCCACA
  GTATCTAACC ATACACAAAC GGTTTTCTTG TATGGCGATG GCTTGTTTTA ACTCTCAGCT
  GACTTAATTT GTCCATAATT ATGCAACTCC AAAATAAGAC AGGCTTTTTA ATACAATGAG
  ATGTTCCAGG ATGGCGGGGA ATCCCAGAGA ATAGGGAAAT AAGGACACCA GCTGTCCTCC
  S
  CCCCCCCCCC CACGCCCCAC CGCCCAAAAT AAGTCTTTGT TTTCAGGGCA ACCTCAAAAG
  TGCCTGGCAC AGTGCAGCTC CGCGGAATGC CCGGCAGGCA GGGAACCCTG GTGCGGTGCA
  GAAGAGCGGT TTACCCGCGA AAGGTAACTG CAGGCCAGCG CTCGCTCCTG ATTTGTCGGC
  TGGTAGCGCG TGCCCGCCCG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324673214	CHEV_14_75530279	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255775132					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:75367912 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6736	CpG island 6736	49 bp proximal
Cpgi6737	CpG island 6737	622 bp proximal
Gm62951	predicted gene, 62951	within coordinates
Lcp1	lymphocyte cytosolic protein 1	658 bp upstream
Lrrc63	leucine rich repeat containing 63	within coordinates
Rr297500	regulatory region 297500	within coordinates
Tssr4477	transcription start site region 4477	155 bp downstream
Tssr126606	transcription start site region 126606	635 bp upstream
Tssr126607	transcription start site region 126607	754 bp upstream
Tssr126608	transcription start site region 126608	801 bp upstream
Tssr126609	transcription start site region 126609	1060 bp upstream
Tssr126610	transcription start site region 126610	1112 bp upstream
Tssr126611	transcription start site region 126611	1549 bp upstream
Tssr126612	transcription start site region 126612	1574 bp upstream
Tssr129761	transcription start site region 129761	114 bp downstream
Tssr129762	transcription start site region 129762	136 bp downstream
Tssr129763	transcription start site region 129763	172 bp downstream
Tssr129764	transcription start site region 129764	436 bp downstream
Tssr129765	transcription start site region 129765	533 bp downstream
Tssr129766	transcription start site region 129766	1103 bp downstream
Tssr129767	transcription start site region 129767	1145 bp downstream