rs255778518 SNP Detail

Summary

• ID
  rs255778518
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24244552 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCTCATTA AGTTGTCTCA
  GCCTTGAACT TACTCTGTCT TCTGGGCGAA CTCAGCCATG TTCACACCTT TCCCTGCTTG
  ATCATAAATT CTTCTCATAG ACCTTACAAT GCAAAGGAAA TGCATGGCCC CCAGAAAGAA
  AGCCTTTCTC CGTGACCTCA TGTTAGTGGT ACACTCCCAC CTTCCAATGT CTAAGCAAAT
  Y
  CAGGAGTTAC TTTTGTGTCA GCTCCTGGAT CTACCCAAAT TAGCACTCTG ATGATGCCCT
  TCAGTGTGGC AAGCCTGGTG GAAAGTTTCA TTTACCCACT GTGAGAAGCC ATGAATATCT
  GGTACACAAG AAATATTTCA AGGATAAAGA AATGGGTCTA GCCTTTACTT TGGAACCAGA
  GTTTCTGACA ATTCATAACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324294208	CHEV_13_24152438	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255778518					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24244552 () rs orientation: forward

Symbol	Name	Function Class
4933427I18Rik	RIKEN cDNA 4933427I18 gene	within coordinates
Carmil1	capping protein regulator and myosin 1 linker 1	within coordinates
Tssr121764	transcription start site region 121764	1256 bp upstream
Tssr121765	transcription start site region 121765	1245 bp upstream