rs255785541 SNP Detail

Summary

• ID
  rs255785541
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:32970055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTAGAACT AGCTATGGTA
  AGAGTAATCA TTATTCTCTG ATACTAAAAA TGGTTTATTT AAATGTATGT CTGATGAAAT
  TTGAATACAA TACTTGATAA GAAAAAAGTA GTGCCCTAAT ATCTGATTCC ATTTTTAAAT
  ATGAGAACAT TAAGCTTAAG AACTGGTCCA TCAATGCTCA GTTATTAAGT AGAGAAGACA
  R
  ACCTAGAACC CATGTTTCTT CTGATTCCCA GGTCTGGGTT GGATTTGCTT TGGGGATTGT
  TGTTGTTGTT GTTGTTGTTG TTGTTGTTGT TGTTACTATT AAAAGGAAAA GGGAAAAGTC
  TCTGACACAT TTCTGTGTCT GCAGCACTGG GCATCCCTGC AGTGGAAGGG TGAGGAATGC
  AGCCTCTCCA GGCTCACCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321780314	CHEV_6_32943120	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255785541					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32970055 () rs orientation: forward

Symbol	Name	Function Class
Chchd3	coiled-coil-helix-coiled-coil-helix domain containing 3	within coordinates
Gm53279	predicted gene, 53279	within coordinates
Gm66358	predicted gene, 66358	1062 bp downstream
Tssr60215	transcription start site region 60215	524 bp downstream
Tssr60216	transcription start site region 60216	1332 bp downstream