rs255813224 SNP Detail

Summary

• ID
  rs255813224
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:128617827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGTTGGAA ACAGAGAGGG
  GAAGTGAGGG CACGGGCCAG GGACAGAGGT GGCCCGGGAC CTGGAAAAGC AGGAGGAGCA
  GAGCGGACCC TGCAGCTCTT TGGCCGTTGG TTGTGAATGC TGCGCATATG TGGGCCAGGC
  TGATAGCAGA GGTGTCAGAG GGACTGAGAT TTAATTATGG CCAGAGGACT GAAGAGTCTC
  Y
  AAGAGAGAAG GAAATGCCTG AGAGGAAAGC AGGCAGGGGC CTCAGCGTGA GCTCTGCTTG
  CCAGAAGCAT CTCTGAGGGC ACTGTGTTCA TCTCTGGGGT CTCCATCTGT CTCTCTGAGT
  GACCAGTGAC TTCCCACGGC CTGGGCTTCA GGGCACTCTG CAAGAGCACT CCACCCTGGC
  GGGAGAGTCA CAGTGGTACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321306936	CHEV_4_128401278	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255813224					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:128617827 () rs orientation: forward

Symbol	Name	Function Class
Gm33712	predicted gene, 33712	within coordinates
Phc2	polyhomeotic 2	within coordinates
Rr600014	regulatory region 600014	93 bp proximal
Tssr39071	transcription start site region 39071	1843 bp downstream