rs255823000 SNP Detail

Summary

• ID
  rs255823000
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:151851474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtattgaaa gaggtaggtt gctggagggc
  aggccctaag gcttgacagc ctgctccact tcctgtctga tctctgcttc ctgctgcatc
  aattatcagg gatacacgtg tcatcccggg actgcccagg gccttcctct tcagaatggg
  Y
  attatcccca ggaatggtga ccaaaatgac ccctctctcc ctcaagctgc ttcttcttgt
  gtatgtggtc acatcaagac aggtcactaa TTGTCCTTGT GTAAATAAAG GACCAAGCGT
  GTCCTCTTTT GCTTTGTTGT GGGAACTTTT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320061197	CHEV_1_153822853	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255823000					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151851474 () rs orientation: forward

Symbol	Name	Function Class
1700025G04Rik	RIKEN cDNA 1700025G04 gene	Intron
Rr420390	regulatory region 420390	434 bp distal
Rr420391	regulatory region 420391	within coordinates
Rr420392	regulatory region 420392	1795 bp proximal