rs255840646 SNP Detail

Summary

• ID
  rs255840646
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:184583941 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAGAATTT TAAACTGGAG TTTGGCAGAA
  AGAAAAACAA ACAGAGTGAG AGATGTCAGC AGTGACCAGG AGATGGGGAT ATTAGAAAGT
  CATGCTGTGT GAGTTAGAGG ACAGGAACAC AAAGCAGGTG TGTGAGGGAA GGGCGGCTTC
  R
  GAGAGAAGGG GAGCTACCTC CGGTGCCGGA GCTTAGGATT TCCGTTGAAG TTGGAAAAGG
  GGAGATAGAA AGGCTCCACT TTCCACGTTA GAAAACAGAC ACTTAGCCGT GAGGATCAGT
  GAGCAACTCC ATGGAGGCAG GGGAAGTGCT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320169912	CHEV_1_186675623	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255840646					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:184583941 () rs orientation: forward

Symbol	Name	Function Class
Gm34451	predicted gene, 34451	within coordinates
Rr372580	regulatory region 372580	1714 bp downstream
Rr396695	regulatory region 396695	609 bp upstream
Rr425307	regulatory region 425307	within coordinates
Rr425308	regulatory region 425308	1500 bp proximal