rs255941165 SNP Detail

Summary

• ID
  rs255941165
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:144055768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAATCTTAC Atatgtatgt atgtatgtat
  gtatgtatgt atgtatgtat gtTTATTGCA atctatctat ctatctattt atttatcATG
  CTTTGATATT TTACTTGCAT ATGTgagagt atcagatacc ctgtaattga aagctacaga
  Y
  tgttgtgaga tgctatgtag gtactgggaa ttgaatgagg ctcctctgaa agagcagcca
  gtgcttttaa cctttgagac atctcgtcag ccccCTAGTT CAAGGATATT AAAGTCAGCT
  TTTTCCATAC TTAGGTCAAA TTCTGCGGAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320011877	CHEV_1_146027160	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255941165					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:144055768 () rs orientation: forward

Symbol	Name	Function Class
Rr12883	regulatory region 12883	168 bp distal
Rr30963	regulatory region 30963	1023 bp distal
Rr396360	regulatory region 396360	1490 bp downstream