rs255996541 SNP Detail

Summary

• ID
  rs255996541
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170785461 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTGTGAAA TTCTGAAGTT TATCTAGAAG
  AGAACAGCAG CCAAGAAAAT CTTGAAACAA ACGAATGAGA GAAAACAGGG CTTTATACAC
  ATCAAAATAT AATAAAgata atgataataa taatgatgat gatgtgatga tgatgatgat
  A
  atgatgTGTA TGCTACTGAG GTGGGAAGAA AGAAATGAAA TAAGGCAACG GAAGAGGACT
  GGACATGGGT GTAGACCTGT GTGTGGGAGT TGATAATGAT ATTTGAACCA TTTCCAATCA
  TTTGCTCAAG GAATAACCTT GGAATACCTA                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320114965	CHEV_1_172888023	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255996541					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170785461 () rs orientation: forward

Symbol	Name	Function Class
Fcgr2b	Fc receptor, IgG, low affinity IIb	725 bp downstream
Gm70986	predicted gene, 70986	within coordinates
Rr20517	regulatory region 20517	940 bp proximal
Rr20518	regulatory region 20518	1540 bp proximal
Rr20519	regulatory region 20519	1939 bp proximal
Tssr14949	transcription start site region 14949	1003 bp downstream
Tssr14950	transcription start site region 14950	1847 bp downstream
Tssr14951	transcription start site region 14951	1925 bp downstream