rs256038833 SNP Detail

Summary

• ID
  rs256038833
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:99779659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATTTGGAA AGTGAACTTA
  ATTATATGTT TTAATTAATG ATGCTTGTAT AATAACTACT AATACTGGAG TAGCTGTGTA
  ACAGCGCCCC ACCCCCCCAG GCTGTCACAC AACTTACACC ATATTTGTGA TGCCATTTTG
  ACCTTAAAAC CAGAACATAA GGCCTAACAG CGCCAAAATG GGAGCAGAAA CCTAAAAACC
  Y
  TGGTTCATAG TTCCAGGATT CAGGGAAGTC TCTAAATGTA CTAACCTTGC TTTGGGGCTT
  CTGTAGTTTT GCTTCTCACT ATTGATGCTA ACCAAAGTAT GTCAACCAGG ATCTGGGTTT
  TGCGCAATAA AAGACAAAAG ACTGTAAGAA TTGGGGCTGC TCAGTGTAGG ATAGTTCCCC
  AAGCAATGGC TGTCTAGCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325082161	CHEV_15_99712209	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256038833					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:99779659 () rs orientation: forward

Symbol	Name	Function Class
Gm18095	predicted gene, 18095	975 bp downstream
Gm18890	predicted gene, 18890	1854 bp upstream
Gm49494	predicted gene, 49494	within coordinates
Gm63271	predicted gene, 63271	within coordinates
Rr308871	regulatory region 308871	1142 bp proximal