rs256056325 SNP Detail

Summary

• ID
  rs256056325
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84927189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTC ACCTAGCCTA GAATCAGAAA
  R
  TCTTGTCCAC AGCAGCAAGA GGGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322748103	CHEV_8_86724459	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256056325					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84927189 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20682	CpG island 20682	1748 bp distal
Cpgi20683	CpG island 20683	within coordinates
Gm26887	predicted gene, 26887	1836 bp upstream
Gm37352	predicted gene, 37352	309 bp upstream
Gm56830	predicted gene, 56830	1975 bp upstream
Gm56836	predicted gene, 56836	1362 bp downstream
Gm64014	predicted gene, 64014	within coordinates
Gm64130	predicted gene, 64130	577 bp downstream
Gm65345	predicted gene, 65345	384 bp upstream
Rr186982	regulatory region 186982	1388 bp distal
Rr186983	regulatory region 186983	within coordinates
Tssr2624	transcription start site region 2624	1774 bp downstream
Tssr78372	transcription start site region 78372	275 bp upstream
Tssr78373	transcription start site region 78373	300 bp upstream
Tssr78374	transcription start site region 78374	371 bp upstream
Tssr78375	transcription start site region 78375	1206 bp upstream
Tssr82082	transcription start site region 82082	57 bp downstream
Tssr82083	transcription start site region 82083	170 bp downstream
Tssr82084	transcription start site region 82084	1064 bp downstream
Tssr82085	transcription start site region 82085	1401 bp downstream
Tssr82086	transcription start site region 82086	1423 bp downstream
Tssr82087	transcription start site region 82087	1452 bp downstream