rs256139690 SNP Detail

Summary

• ID
  rs256139690
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23706824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGCATAA CGTGGACACT
  GTGCTCTGTC TCTGAGATGC TTGATGTCAG GAACACCTGA GCAGTCATAT CCTGGCCTTC
  CCTGCACATT TTCTCTTTAT CTTTTATGTT TTACAAATAC CAAACATGTG ACATATTTAT
  AAAATAAATG CTTATAGACA TTGTGTGTGT GTGTGTGTGT GTGTGTGGAG GGATTTAGGG
  K
  ATTGGAACTT TCTCTAGGTG TAATGTATCT AGGGCACTGT CACTCTTAAG AGCATACCTG
  AGTGATGCTT TTAATTGCAT CTAAGTGTGT TAGAAAACGG GGAGGTGGAT GTGGGGATAG
  TTTTGCCTTT CTGAGCCTTC CATCTTGAGA GAAGCCAGGC ACAATGGTGT CTGCCTGTAA
  TCCCAGCACT TGGTGAGTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324289683	CHEV_13_23614523	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256139690					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23706824 () rs orientation: forward

Symbol	Name	Function Class
Gm61424	predicted gene, 61424	38 bp downstream
n-TSgct4	nuclear encoded tRNA serine 4 (anticodon GCT)	703 bp downstream
Rr271078	regulatory region 271078	1777 bp proximal
Rr281117	regulatory region 281117	423 bp distal