rs256148113 SNP Detail

Summary

• ID
  rs256148113
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61181628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGACAAAAT CCAGGGATTC
  CCACTAAAAC TAGAAGTGCC GGCTCCAGGG TAACATCGCT TTTCCCATTT CTCCATTCTG
  TTTTCCCCAT CATGGAACAC AGCTCTGGAG GACTTGGTGT TTCTTTTTGT TTGTTTGTTT
  TTGTTTTTGT TTTAAGTGTT AAACAAAGTA AAGGTTGTAA GGACTTTGAG TCTTCGCATG
  Y
  GCCACACGCA AACACAGTCA GCATCATCTT CTCCCCAGAG CTCAAGACAG GAGCCGTGAG
  CCAGCCCAGC CCTCCCCCTG AAAGCTGTGG AATGGACCCT GCCTGCCCTT CCCACGGGAA
  CTCCAGCAGA TTCCTCTGCA GGAAGAGCTC CTGTGTGAAT CCTGAGAGCC TGTCTTCCCC
  AGAGATCCCT GAATTAAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323328394	CHEV_10_60808597	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256148113					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61181628 () rs orientation: forward

Symbol	Name	Function Class
Pald1	phosphatase domain containing, paladin 1	within coordinates
Rr215533	regulatory region 215533	1228 bp distal
Rr215534	regulatory region 215534	1173 bp proximal
Rr228161	regulatory region 228161	1428 bp distal
Rr228162	regulatory region 228162	within coordinates