rs256152048 SNP Detail

Summary

• ID
  rs256152048
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:182781612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTAA CACACAAGTA AAGTCCACAG
  R
  CATGGTGATG GTACCTGCCT GTAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320163329	CHEV_1_184884178	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256152048					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:182781612 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1152	CpG island 1152	688 bp proximal
Gm69962	predicted gene, 69962	297 bp upstream
Rr425013	regulatory region 425013	308 bp distal
Rr425014	regulatory region 425014	62 bp distal
Rr425015	regulatory region 425015	251 bp proximal
Rr425016	regulatory region 425016	752 bp proximal
Tlr5	toll-like receptor 5	741 bp upstream
Tssr10570	transcription start site region 10570	723 bp upstream