rs256159439 SNP Detail

Summary

• ID
  rs256159439
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:77716371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGTGAGG GTGGCACGCT
  CTCCTGCCTG GCAGAATGGG GAACCATAAC CCAGAGTCCC AGCCAGACAA AAAAATGCCC
  CTCTTCTCTT GCTACCTGAG GCTCAGACCC TGTCCTAAGC CTTTCTGAGC CTTCAGTGTA
  CTTGCCACAA ACCCTAATGT CTGCTGCTGT GGGTTGAGGG TGTGGGGTGA GACTCCAAAT
  Y
  GAGAGGCTAT AATCCTTCCC TCCATCGTCA CAAGAGGAAG GCAGATGCAG TCTCCCAGGG
  CCTTCGAGGA GGCAGCAGCA CCCTCAAACA GGGAAACAGT GTAGGGGCAA AGATAAGTAT
  GTGAGTCCTC ACTCCACAGC CGTGGGGAAC AAGCTGTCAT CCTTTATCTT GGATATCTTG
  TTGCCTGGGG CAGTGGCTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323755841	CHEV_11_77639047	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256159439					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:77716371 () rs orientation: forward

Symbol	Name	Function Class
D11Bhm40	DNA segment, Chr 11, Boehm 40	775 bp proximal
Myo18a	myosin XVIIIA	within coordinates
Rr236557	regulatory region 236557	1971 bp distal
Rr236558	regulatory region 236558	30 bp proximal
Rr251684	regulatory region 251684	within coordinates